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Sourdough Blueberry Muffins

October 22, 2025
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These sourdough blueberry muffins are tender, lightly sweet, and absolutely packed with juicy blueberries. They’re fast, too, with no long rest or fermenting, they are ready to eat in about 30 minutes. Just mix, bake, and enjoy the kind of muffin that tastes like it came from your favorite local bakery.

This is the exact recipe from the Pauline Manor Bakery, and it’s the one I use in my own kitchen when I want something a little special to drop off at a neighbor’s house or tuck into a breakfast basket with cinnamon rolls and a fresh loaf of bread.

Why Add Sourdough Starter to Muffins?

Sourdough starter adds a subtle tang and a depth of flavor that makes these muffins taste richer and more complex than your average box or bag variety. It also helps with the texture because the muffins turn out super moist and dense enough to hold butter perfectly.

The flavor is soft and balanced, not “sourdough-y.” You’re getting all of the benefits of your bubbly starter with none of the tangy punch that sometimes comes with long fermentation.

Blueberries: Fresh vs Frozen

You can use either fresh or frozen blueberries in this recipe, and both options work beautifully. Fresh blueberries will hold their shape a bit better and don’t bleed into the batter, so your muffins will have a cleaner look. But frozen berries are more convenient and budget-friendly, especially when blueberries aren’t in season.

If you’re using frozen blueberries, don’t thaw them before adding to the batter. Just toss them in a little flour straight from the freezer and gently fold them in. This helps prevent the muffins from turning an odd shade of purple and keeps the berries from sinking to the bottom. I’ve made this recipe with both options, and I promise you’ll get great results either way.

Storage and Freezing Tips

Like most baked goods made with sourdough, these muffins hold their moisture well. You can store them at room temperature in an airtight container for about two days. After that, I recommend transferring them to the fridge, especially if your kitchen is warm. They’ll stay fresh in the fridge for up to five days. Just bring them to room temperature before serving, or pop one in the microwave wrapped in a damp paper towel for 10–15 seconds if you like them warm.

For longer storage, these muffins freeze beautifully. Wrap each muffin individually in parchment or plastic wrap, then place them in a freezer bag or airtight container. They’ll keep for up to three months. To reheat, you can let one thaw at room temperature or microwave straight from frozen. It’s a smart move to keep a few tucked away for busy mornings or when you need a quick snack.

How to Make It Dairy-Free

It’s easy to make this recipe dairy-free without sacrificing flavor or texture. You’ll want to swap the melted butter for either coconut oil or a plant-based butter substitute. I’ve tested it with both, and while the flavor shifts slightly, the muffins still come out soft, fluffy, and full of that blueberry goodness.

Coconut oil gives a slightly sweet, tropical hint, which actually pairs surprisingly well with the berries. Just make sure your eggs and starter aren’t too cold when mixing, or the coconut oil might solidify.

For the sour cream, use a dairy-free yogurt (plain or vanilla) or dairy-free sour cream made from coconut or almond milk. I’ve had good results with Kite Hill almond milk sour cream and Cocojune plain coconut yogurt. Just make sure it’s unsweetened so the muffins don’t end up too sweet.

If you’re avoiding dairy for allergy reasons or dietary preferences, you’ll be happy to know this is one of those recipes that plays nicely with substitutions.

Muffin Variations to Try

Once you’ve nailed this base recipe, you can change it up a dozen different ways. A splash of lemon juice and zest turns these into lemon blueberry muffins with a sunny, citrusy twist. You can also stir in a bit of cinnamon or cardamom for a warm, cozy flavor in fall and winter.

If you want to make them extra special, a streusel topping is always a good idea. Just mix together some flour, brown sugar, butter, and a pinch of cinnamon, then sprinkle it over each muffin before baking. It gives you that perfect bakery-style crunch on top.

And while this recipe was built around blueberries, don’t be afraid to swap in other fruits. Raspberries, chopped strawberries, or even a mixed berry blend would all work well. You can also go full dessert-mode and toss in a handful of chocolate chips. Blueberry and chocolate? Trust me, it’s not as weird as it sounds.

Frequently Asked Questions

Can I use sourdough discard?

Yes, this recipe works just fine with discard. Because the rise comes from baking soda and baking powder, not the starter itself, you can use inactive starter straight from the fridge. Just make sure it smells fresh and hasn’t gone too funky or acidic.

Can I make this gluten-free?

I haven’t tested a gluten-free version yet, but a 1:1 gluten-free flour blend should work as long as you also have a gluten-free starter. Let the batter rest for 20 minutes before baking to help hydrate the flour and avoid grittiness.

Can I bake this as a loaf or cake instead?

Absolutely. You can pour the batter into a greased loaf pan or an 8×8 cake pan and bake until a toothpick inserted in the center comes out clean. It will take longer than muffins – usually around 35–40 minutes, depending on your oven.

What size muffin liners do I need?

This recipe makes exactly 12 standard-size muffins. If you’re using a larger or jumbo muffin tin, you’ll need to increase the bake time slightly and expect fewer total muffins.

A Note from the Bakery

This is one of those recipes that feels a little bit magical – not because it’s complicated or fussy, but because it hits that sweet spot of being just sweet enough, just soft enough, just easy enough. It’s the kind of thing you bake on a Sunday morning when the coffee is hot, the dogs are finally quiet, and you’ve got just enough blueberries left in the fridge to make something wonderful.

It’s also a great way to use up extra sourdough starter without committing to a full bread day. If you’ve got starter sitting in the fridge that’s not quite active enough for a loaf, don’t toss it. Turn it into muffins instead.

And if you’re the kind of person who likes to stock your freezer with homemade snacks and breakfast options, this is one recipe to add to your rotation. They reheat beautifully, travel well, and make a sweet little gift tucked into a lunch bag or dropped off with a friend.

Sourdough Blueberry Muffins

Print Pin Rate
Course: Breakfast
Cuisine: American
Keyword: sourdough
Prep Time: 5 minutes minutes
Cook Time: 21 minutes minutes
Servings: 12 muffins
Calories: 189kcal

Ingredients

  • 1 stick unsalted butter melted
  • 1/2 cup active sourdough starter
  • 1 large egg room temperature
  • ¾ cup sour cream
  • 1 teaspoon vanilla extract
  • 1⅔ cups all-purpose flour
  • 1 cup sugar
  • 2 teaspoons baking powder
  • ½ teaspoon baking soda
  • ⅔ cup fresh blueberries
  • 1 tbsp turbinado sugar for sprinkling on top

Instructions

  • Preheat your oven to 425°F and line a 12-cup muffin pan with paper liners. The high starting temperature helps the muffins rise quickly for that nice bakery-style dome, so make sure your oven is fully preheated before the batter goes in.
  • In a medium bowl, whisk together the flour, baking powder, and baking soda. Set that aside for a minute.
  • In a large bowl, whisk the melted butter, sourdough starter, egg, sour cream, sugar, and vanilla extract until the mixture looks smooth and creamy. It’s okay if the sourdough starter leaves a few small streaks; that’s normal.
  • Add the dry ingredients to the wet mixture and stir gently until combined. The batter should be thick, not runny. If it feels too loose, add a tablespoon or two of flour. Gently fold in the blueberries, being careful not to overmix so they don’t burst and turn the batter purple.
  • Spoon the batter evenly into the prepared muffin cups, filling each nearly to the top. Sprinkle a little turbinado sugar on each muffin for a crunchy, golden finish.
  • Bake the muffins at 425°F for 5 minutes, then lower the oven temperature to 375°F and continue baking for another 15–18 minutes, or until a toothpick inserted into the center comes out clean. Don’t open the oven during the first part of baking, since that initial blast of heat is what helps the muffins puff up nicely.
  • Let them cool in the pan for about five minutes, then move them to a wire rack to finish cooling completely.
  • Once cool, the muffins can be stored in an airtight container at room temperature for up to three days. You can also freeze them individually and warm them up later in the oven or microwave when you need a quick breakfast or snack.

Notes

If your sourdough starter is thick and bubbly, you’ll get a slightly lighter muffin. Discard works just as well, though, and gives them a little more of that rich sourdough flavor.
For the best muffin tops, make sure your oven is fully preheated before baking. Starting them at 425°F for the first 5 minutes gives the batter a quick lift, then lowering to 375°F helps them bake through without drying out.
The batter should be thick enough to scoop, not pour. If it seems too thin, add another tablespoon or two of flour before folding in the blueberries.
You can use either fresh or frozen blueberries. If you’re using frozen, don’t thaw them first. Fold them in straight from the freezer and bake for an extra minute or two.
These muffins will stay soft for two to three days when stored in an airtight container at room temperature. To keep them longer, freeze them individually and warm them up when needed.
For a little extra flavor, try mixing lemon zest into the batter before baking, or swap the blueberries for raspberries, blackberries, or diced peaches.

Nutrition

Serving: 1g | Calories: 189kcal | Carbohydrates: 37g | Protein: 3g | Fat: 4g | Saturated Fat: 2g | Polyunsaturated Fat: 0.4g | Monounsaturated Fat: 1g | Trans Fat: 0.004g | Cholesterol: 22mg | Sodium: 56mg | Potassium: 61mg | Fiber: 1g | Sugar: 19g | Vitamin A: 116IU | Vitamin C: 1mg | Calcium: 21mg | Iron: 1mg
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We’re Mike and Lynsey Kmetz, a couple with five dachshunds and one very big project: restoring a 1908 Victorian we discovered on Zillow that’s now called Pauline Manor. Tucked away on a quiet side street in Cantonment, Florida, Pauline Manor is now where a micro-bakery, garden, and slow-steading lifestyle come together with thrifted charm and a whole lot of heart. We’re keeping history alive, one loaf, garden veggie, and project at a time.

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